Engineering
- Abaqus - only with own license — a Finite Element Analysis Package for Engineering Application
- Ansys Suite — The full Ansys Academic Multiphysics Campus Solution is available, e.g. Mechanical, CFX, Fluent, LS-Dyna, Electronic, SCADE (but not Lumerical, GRANTA).
- MATLAB - only with own license — a proprietary multi-paradigm programming language and numeric computing environment developed by MathWorks
- OpenFOAM — an object-oriented open source CFD toolkit
- STAR-CCM+ — a Package for Computational Fluid Dynamics Simulations
- Bring your own license — of any software from you own license server
- HDF5 libraries / binaries
- ParaView — An interactive data analysis and visualisation tool with 3D rendering capability
Chemistry
- CP2K — A package for atomistic simulations of solid state, liquid, molecular, and biological systems offering a wide range of computational methods with the mixed Gaussian and plane waves approaches.
- exciting — a full-potential all-electron code, employing linearized augmented planewaves (LAPW) plus local orbitals (lo) as basis set.
- Gaussian — a computational chemistry application provided by Gaussian Inc https://gaussian.com/.
- GPAW — a density functional theory Python code based on the projector-augmented wave method.
- GROMACS — a versatile package to perform molecular dynamics for systems with hundreds to millions of particles.
- NAMD — a parallel, object-oriented molecular dynamics code designed for high-performance simulations of large biomolecular systems using force fields.
- Octopus — a software package for density-functional theory (DFT), and time-dependent density functional theory (TDDFT)
- Quantum ESPRESSO — an integrated suite of codes for electronic structure calculations and materials modeling at the nanoscale, based on DFT, plane waves, and pseudopotentials.
- RELION — REgularised LIkelihood OptimisatioN is a stand-alone computer program that employs an empirical Bayesian approach to refinement of (multiple) 3D reconstructions or 2D class averages in electron cryo-microscopy(cryo-EM)
- SIESTA — “both a method and its computer program implementation, to perform efficient electronic structure calculations and ab initio molecular dynamics simulations of molecules and solids.” SIESTA project https://siesta-project.org/siesta/About/overview.html
- TURBOMOLE — TURBOMOLE is a computational chemistry program that implements various quantum chemistry methods (ab initio methods). It was initially developed at the University of Karlsruhe.
- VASP — a first-principles code for electronic structure calculations and molecular dynamics simulations in materials science and engineering.
- Wannier90 — A program that calculates maximally-localised Wannier functions.
- Abinit
- ASE – The Atomic Simulation Environment – a set of tools and Python modules for setting up, manipulating, running, visualizing, and analyzing atomistic simulations.
- LAMMPS – A parallel, classical potential molecular dynamics code for solid-state materials, soft matter and coarse-grained or mesoscopic systems.
- TURBOMOLE – A program package for ab initio electronic structure calculations. (see "module avail turbomole" on the SMP cluster)
- NWChem – A general computational chemistry code with capabilities from classical molecular dynamics to highly correlated electronic structure methods, designed to run on massively parallel machines.
- MOLPRO – A comprehensive system of ab initio programs for advanced molecular electronic structure calculations.
- PLUMED – A tool for trajectory analysis and plugin for molecular dynamics codes for free energy calculations in molecular systems
- CPMD – A plane wave / pseudopotential implementation of DFT, designed for massively parallel ab-initio molecular dynamics.
- BandUP – Band unfolding for plane wave based electronic structure calculations.
Numerics
Titel | Ersteller | Geändert |
---|---|---|
OpenFOAM | Jack Ogaja | Okt. 11, 2024 |
MATLAB - only with own license | Scientific Consultant01 | Aug. 14, 2024 |
FFTW3 | Martin Schmidt | Feb. 23, 2022 |
GSL | Martin Schmidt | Juni 17, 2021 |
NFFT | Martin Schmidt | Sept. 17, 2020 |
Scotch | Marcus Boden | Sept. 10, 2020 |
MUMPS | Marcus Boden | Sept. 10, 2020 |
ScaLAPACK | Marcus Boden | Sept. 09, 2020 |
BLAS | Marcus Boden | Sept. 09, 2020 |
Program development tools, compilers, translators, languages, performance analysis
Titel | Ersteller | Geändert |
---|---|---|
Python | Marcus Boden | Juni 03, 2024 |
LIKWID Performance Tool Suite | Jack Ogaja | Feb. 22, 2024 |
VS Code | Freja Nordsiek | Apr. 19, 2023 |
Anaconda (conda) and Mamba | Freja Nordsiek | Apr. 19, 2023 |
Valgrind instrumentation framework | Christian Koehler | Feb. 04, 2022 |
Charm++ | Marcus Boden | Sept. 10, 2021 |
Patchelf | Martin Schmidt | Aug. 13, 2020 |
antlr | Martin Schmidt | Juli 24, 2020 |
Visualisation tools
Titel | Ersteller | Geändert |
---|---|---|
ParaView | Marcus Boden | Nov. 11, 2024 |
NCL | Martin Schmidt | Juni 17, 2021 |
pyfesom2 | Natalja Rakowsky | Dez. 04, 2020 |
Ferret - Data Visualization and Analysis | Martin Schmidt | Sept. 09, 2020 |
NcView | Martin Schmidt | Aug. 20, 2020 |
GraDS | Martin Schmidt | Juli 29, 2020 |
Tools and libraries for data manipulation
Titel | Ersteller | Geändert |
---|---|---|
HDF5 libraries / binaries | Martin Schmidt | Aug. 14, 2024 |
AEC library | Martin Schmidt | Aug. 29, 2023 |
UDUNITS2 | Martin Schmidt | Aug. 29, 2023 |
Szip | Martin Schmidt | Aug. 29, 2023 |
NCO | Martin Schmidt | Aug. 29, 2023 |
ECCODES | Martin Schmidt | Aug. 29, 2023 |
netCDF | Martin Schmidt | Juli 29, 2023 |
PROJ | Martin Schmidt | Juli 29, 2023 |
CDO | Martin Schmidt | Juli 29, 2023 |
R | Martin Schmidt | Sept. 10, 2021 |
pigz | Marcus Boden | Sept. 10, 2020 |
libtiff | Marcus Boden | Sept. 10, 2020 |
Miscellaneous software packages
Titel | Ersteller | Geändert |
---|---|---|
Arm DDT | Tobias Kramer | Juli 02, 2024 |
Singularity/Apptainer | Christian Koehler | Feb. 28, 2024 |
Intel oneAPI MPI | Lewin Stein | Feb. 27, 2024 |
Intel oneAPI Compiler Suite | Lewin Stein | Feb. 27, 2024 |
SYCL | Scientific Consultant01 | Feb. 27, 2024 |
VTune profiler | Lewin Stein | Apr. 27, 2023 |
Intel oneAPI Performance Tools | Lewin Stein | Apr. 25, 2023 |
OpenMPI | Lewin Stein | Apr. 24, 2023 |
nocache | Martin Schmidt | Juni 18, 2021 |