HDF5 is a data model, library, and file format for storing and managing data. It can represent very complex data objects and a wide variety of metadata.

Documentation

For a documentation visit the HDF group support portal

Installed versions

Serial HDF5

The libraries are threadsafe and can be used in omp-parallel codes.

Parallel hdf5

1.10.5	intel/18.0.6	`hdf5/intel/1.10.5`	v110, serial *
1.10.5	gcc/7.5.0	`hdf5/gcc.7/1.10.5`	v110, serial *
1.10.5	gcc/8.3.0	`hdf5/gcc.8/1.10.5`	v110, serial *
1.10.5	intel/18.0.6, impi/2018.5	`hdf5-parallel/impi/intel/1.10.5`	v110, parallel *
1.10.6	gcc/9.2.0, openmpi/gcc.9/3.1.5	`hdf5-parallel/ompi/gcc/1.10.6`	v110, parallel *
1.10.6	intel/18.0.6, openmpi/intel/3.1.6	`hdf5-parallel/ompi/gcc/1.10.6`	v110, parallel *
1.12.0	intel/19.0.5	`hdf5/intel/1.12.0`	v112, serial *
1.12.0	gcc/8.3.0	`hdf5/gcc.8/1.12.0`	v112, serial *

The libraries are threadsafe and can be used in omp-parallel codes.

obsolte versions

Modules

Example Jobscripts

#!/bin/bash
#SBATCH -p

module load