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The compute nodes of the CPU cluster of system Lise are organised via the following slurm Slurm partitions.
Partition name | Node numbercount | CPU | Main memory (GB) | Max. nodes per job | Max. jobs per user (running/ queued)per user | Walltime Wall time limit (hh:mm:ss) | Remark |
|---|---|---|---|---|---|---|---|
| standard96cpu-clx | 1204688 | Cascade 9242 | 362 | 512 | 16 128 / 500 | 12:00:00 | default partition |
| standard96cpu-clx:test | 32 dedicated +128 on demand | 362 | 16 | 1 / 500 | 01:00:00 | test nodes with higher priority but lower walltimeless wall time | |
| large96 | 28 | 747 | 8 | 16 128 / 500 | 12:00:00 | fat memory nodes | |
| large96:test | 2 dedicated +2 on demand | 747 | 2 | 1 / 500 | 1001:00:00 | fat memory test nodes with higher priority but lower walltimeless wall time | |
| large96:shared | 2 dedicated | 747 | 1 | 16 128 / 500 | 48:00:00 | fat memory nodes for data pre- and postprocessingpost-processing | |
| huge96 | 2 | 1522 | 1 | 16 128 / 500 | 24:00:00 | very fat memory nodes for data pre- and postprocessingpost-processing |
See Slurm usage how to pass the 12h walltime wall time limit with job dependencies.
Charge rates
Charge rates for the slurm partitions you find in Accounting.
Fat-Tree Network of Lise
See OPA Fat Tree network of Lise
Emmy (Göttingen)
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Partition (number holds cores per node)
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Usable memory MB per node
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CPU, GPU type
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gcn#
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2 dedicated
+6 on demand
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747 000
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1522 000
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very fat memory nodes for data pre- and postprocessing
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8 dedicated
+64 on demand
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181 000
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764 000
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2 dedicated
+2 on demand
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764 000
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2 dedicated
+6 on demand
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500 000 MB per node
(40GB HBM per GPU)
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see /wiki/spaces/PUB/pages/428683
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Skylake 6148 + 4 Nvidia V100 32GB,
Zen3 EPYC 7513 + 4 NVidia A100 40GB,
and Zen2 EPYC 7662 + 8 NVidia A100 80GB
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764 000 MB (32 GB per GPU)
or 500 000 MB (10GB or 20GB HBM per MiG slice)
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Skylake 6148 + 4 Nvidia V100 32GB,
Zen3 EPYC 7513 + 4 NVidia A100 40GB splitted in 2g.10gb and 3g.20gb slices
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150 per GPU (V100)
or 47 per MiG slice (A100)
see /wiki/spaces/PUB/pages/428683
A100 GPUs are split into slices via MIG (3 slices per GPU)
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764 000 MB (32 GB per GPU)
or 500 000 MB (10GB or 20GB HBM per MiG slice)
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Skylake 6148 + 4 Nvidia V100 32GB,
Zen3 EPYC 7513 + 4 NVidia A100 40GB splitted in 2g.10gb and 3g.20gb slices
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150 per GPU (V100)
or 47 per MiG slice (A100)
* 600 for the nodes with 4 GPUs, and 1200 for the nodes with 8 GPUs
Which partition to choose?
If you do not request a partition, your job will be placed in the default partition, which is standard96.
The default partitions are partition is suitable for most calculations. The :test partitions are, as the name suggests, intended for shorter and smaller test runs. These have a higher priority and a few dedicated nodes, but are limited in time and number of nodesprovide only limited resources. Shared nodes are suitable for pre- and postprocessingpost-processing. A job running on a shared node is only accounted for its core fraction (cores of job / all cores per node). All non-shared nodes are exclusive to one job , which implies that full NPL are paid.Details about the CPU/GPU types can be found below.
The network topology is described hereonly at a time.
The available home/local-ssd/work/perm storages file systems are discussed in Storage under File Systems.
An For an overview of all Slurm partitions and node statuses is provided bystatus of nodes: sinfo -r
To see For detailed information about a particular nodes type: scontrol show node <nodename>
Charge rates
Charge rates for the Slurm partitions can be found under Accounting.
Fat-Tree Communication Network of Lise
See OPA Fat Tree network of Lise
List of CPUs
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| Short name | Link to manufacturer specifications | Where to find | Units per node | Cores per unit | Clock speed | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cascade 9242 | Intel Cascade Lake Platinum 9242 (CLX-AP) | Lise and Emmy compute partitionsCPU partition "Lise" | 2 | 48 | 2.3 | ||||||||||||||||||||||
| Cascade 4210 | Intel Cascade Lake Silver 4210 (CLX) | blogin[1-8], glogin[3-8]6] | 2 | 10 | 2.2 | Skylake 6148 | Intel Skylake Gold 6148 | Emmy compute partitions | 2 | 20 | 2.4 | Skylake 4110 | Intel Skylake Silver 4110 | glogin[1-2] | 2 | 8 | 2.1 | Tesla V100 | NVIDIA Tesla V100 32GB | Emmy grete partitions | 4 | 640/5120* | Tesla A100 | NVIDIA Tesla A100 40GB and 80GB | Emmy grete partitions | 4 or 8 | 432/6912* |
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